Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm24473-201ENSMUST00000104483 131 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm22710-201ENSMUST00000116892 125 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm12094-201ENSMUST00000121781 472 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm24422-201ENSMUST00000157800 119 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm9114-201ENSMUST00000188558 997 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm37383-201ENSMUST00000191750 745 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm19092-201ENSMUST00000209036 969 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm18907-201ENSMUST00000209719 932 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm3678-201ENSMUST00000218888 492 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Lima1Q9ERG0 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm25916-201ENSMUST00000104263 131 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm12229-201ENSMUST00000120487 468 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm14613-201ENSMUST00000122239 752 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm15187-201ENSMUST00000122329 264 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm22728-201ENSMUST00000158087 129 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm26025-201ENSMUST00000158655 271 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm23027-201ENSMUST00000158771 158 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm27001-201ENSMUST00000182252 936 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Mir8114-201ENSMUST00000183582 111 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29048-201ENSMUST00000185342 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29403-201ENSMUST00000185491 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28234-201ENSMUST00000185657 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28248-201ENSMUST00000186093 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29633-202ENSMUST00000186217 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28829-201ENSMUST00000186231 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28261-201ENSMUST00000186417 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm8506-201ENSMUST00000186661 829 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28815-201ENSMUST00000186751 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28608-201ENSMUST00000186860 615 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms