Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm44752-201ENSMUST00000207140 3305 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm15779-201ENSMUST00000117470 412 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm9434-201ENSMUST00000118975 813 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm11662-201ENSMUST00000121389 1193 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm14143-201ENSMUST00000121686 357 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Klra11-ps-201ENSMUST00000122033 810 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm4725-201ENSMUST00000151048 587 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm23897-201ENSMUST00000158110 158 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm26167-201ENSMUST00000158423 253 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Mir5623-201ENSMUST00000176631 70 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm28655-201ENSMUST00000191538 692 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm8388-201ENSMUST00000193000 756 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm37716-201ENSMUST00000193553 947 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm32102-201ENSMUST00000196885 241 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm42818-201ENSMUST00000198869 987 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm43040-201ENSMUST00000202399 558 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm7210-201ENSMUST00000209309 1067 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 AC157017.1-201ENSMUST00000220148 364 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 AC165157.2-201ENSMUST00000222265 367 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 AC123058.1-201ENSMUST00000223748 437 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 AC125223.1-201ENSMUST00000224004 749 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 AC134577.2-201ENSMUST00000228541 715 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm6776-201ENSMUST00000057752 900 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.58□□□□□ -1.2
Trim42Q9D2H5 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim42Q9D2H5 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 AC122887.2-201ENSMUST00000219465 1603 ntBASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Gm12838-201ENSMUST00000116278 325 ntBASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Gm15766-201ENSMUST00000118025 813 ntBASIC7.57□□□□□ -1.2
Trim42Q9D2H5 Gm15233-201ENSMUST00000118747 400 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms