Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm14201-201ENSMUST00000117627 289 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm8624-201ENSMUST00000118083 432 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm26738-201ENSMUST00000181312 601 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm9274-201ENSMUST00000182505 984 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm29160-201ENSMUST00000190094 699 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm42558-201ENSMUST00000200982 265 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm45196-201ENSMUST00000206751 825 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm2975-201ENSMUST00000209710 820 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm18907-201ENSMUST00000209719 932 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm4796-201ENSMUST00000219802 624 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Use1Q9CQ56 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Use1Q9CQ56 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Use1Q9CQ56 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Use1Q9CQ56 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Use1Q9CQ56 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm25083-201ENSMUST00000102319 92 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm14070-201ENSMUST00000120773 428 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm23222-201ENSMUST00000158117 76 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm24176-201ENSMUST00000158928 121 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm9672-201ENSMUST00000166437 425 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm20691-201ENSMUST00000176889 333 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm29048-201ENSMUST00000185342 615 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm29403-201ENSMUST00000185491 615 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm28234-201ENSMUST00000185657 615 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm28248-201ENSMUST00000186093 615 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm29633-202ENSMUST00000186217 615 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm28829-201ENSMUST00000186231 615 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm28261-201ENSMUST00000186417 615 ntBASIC6.19□□□□□ -1.42
Use1Q9CQ56 Gm28815-201ENSMUST00000186751 615 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms