Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim8Q99PJ2 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim8Q99PJ2 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim8Q99PJ2 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim8Q99PJ2 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Trim8Q99PJ2 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim8Q99PJ2 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim8Q99PJ2 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm23484-201ENSMUST00000104178 131 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm13163-201ENSMUST00000119875 336 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm22882-201ENSMUST00000157749 124 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm4207-201ENSMUST00000173144 960 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm17937-201ENSMUST00000197908 742 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm42646-201ENSMUST00000202233 914 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm42573-201ENSMUST00000202327 478 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm44865-201ENSMUST00000207240 531 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm19201-201ENSMUST00000210127 778 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm5119-201ENSMUST00000215858 634 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm11360-201ENSMUST00000221898 262 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm26130-201ENSMUST00000083171 138 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm22053-201ENSMUST00000083394 200 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Zfp850-201ENSMUST00000099111 941 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim8Q99PJ2 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Trim8Q99PJ2 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Trim8Q99PJ2 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm24284-201ENSMUST00000104240 142 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm22152-201ENSMUST00000116966 125 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm12306-201ENSMUST00000117256 171 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm11835-201ENSMUST00000120635 663 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm13940-201ENSMUST00000121023 301 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm23884-201ENSMUST00000122687 294 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm24893-201ENSMUST00000122745 369 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm26323-201ENSMUST00000157743 175 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm7991-201ENSMUST00000168668 591 ntBASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim8Q99PJ2 Gm6536-201ENSMUST00000171180 615 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms