Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clrn1Q8K445 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.6□□□□□ -1.35
Clrn1Q8K445 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.6□□□□□ -1.35
Clrn1Q8K445 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.6□□□□□ -1.35
Clrn1Q8K445 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clrn1Q8K445 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm12262-201ENSMUST00000119915 305 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm12587-201ENSMUST00000120180 427 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm24228-201ENSMUST00000158829 129 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm7418-201ENSMUST00000162120 801 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm28934-201ENSMUST00000186491 346 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Trbv28-201ENSMUST00000192804 264 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm37689-201ENSMUST00000193139 275 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm8869-201ENSMUST00000195222 947 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm43664-201ENSMUST00000196038 734 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm42804-201ENSMUST00000199701 178 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm43295-201ENSMUST00000201439 412 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm31520-201ENSMUST00000203048 733 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Ube2nl-201ENSMUST00000085228 456 ntBASIC6.59□□□□□ -1.35
Clrn1Q8K445 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clrn1Q8K445 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.59□□□□□ -1.36
Clrn1Q8K445 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Clrn1Q8K445 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Clrn1Q8K445 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Clrn1Q8K445 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Clrn1Q8K445 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.58□□□□□ -1.36
Clrn1Q8K445 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Clrn1Q8K445 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.58□□□□□ -1.36
Clrn1Q8K445 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Clrn1Q8K445 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Clrn1Q8K445 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Clrn1Q8K445 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.58□□□□□ -1.36
Clrn1Q8K445 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Clrn1Q8K445 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Clrn1Q8K445 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Clrn1Q8K445 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Clrn1Q8K445 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms