Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm37285-201ENSMUST00000194465 1139 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm9504-201ENSMUST00000196322 468 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm4751-201ENSMUST00000200620 1105 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm7463-201ENSMUST00000201541 547 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 AC154573.2-201ENSMUST00000224174 378 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm12842-201ENSMUST00000117298 476 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm12507-201ENSMUST00000119155 415 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm15621-201ENSMUST00000119162 364 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm12540-201ENSMUST00000121938 319 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm14847-201ENSMUST00000121978 519 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm9064-201ENSMUST00000163579 566 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm8582-201ENSMUST00000164061 789 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm29156-201ENSMUST00000187764 499 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm29161-201ENSMUST00000188250 699 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm18849-201ENSMUST00000189861 560 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm38068-201ENSMUST00000192546 540 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm37005-201ENSMUST00000193281 1164 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm6649-201ENSMUST00000199743 1165 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm19764-201ENSMUST00000203630 649 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm17997-201ENSMUST00000211801 840 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Thap6-201ENSMUST00000191860 3151 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Brf1Q8CFK2 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm12175-201ENSMUST00000122081 345 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm7613-201ENSMUST00000139070 487 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm22132-201ENSMUST00000175316 100 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm27295-201ENSMUST00000184264 153 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm27299-201ENSMUST00000184593 103 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm43203-201ENSMUST00000200130 558 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm43459-201ENSMUST00000202093 331 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms