Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Snord88a-201ENSMUST00000116723 90 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm11987-201ENSMUST00000118524 381 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm15596-201ENSMUST00000121139 784 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm6451-201ENSMUST00000121488 717 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm11609-201ENSMUST00000121926 793 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm21877-201ENSMUST00000185640 694 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm29663-201ENSMUST00000186962 853 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm7804-202ENSMUST00000194187 854 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm43160-201ENSMUST00000196453 421 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm18620-201ENSMUST00000222295 324 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.81□□□□□ -1.16
Nup88Q8CEC0 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup88Q8CEC0 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Mir674-201ENSMUST00000102421 100 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm22284-201ENSMUST00000104132 132 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm11318-201ENSMUST00000118640 961 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm11553-201ENSMUST00000120682 240 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm15349-201ENSMUST00000121154 204 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm11472-201ENSMUST00000121305 556 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm23756-201ENSMUST00000157582 114 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm9167-201ENSMUST00000182469 962 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Mir7046-201ENSMUST00000183435 66 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Mir6244-201ENSMUST00000184156 117 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm18781-201ENSMUST00000211252 924 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms