Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm14796-201ENSMUST00000121216 959 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm12181-201ENSMUST00000121448 531 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Mir1929-201ENSMUST00000158635 93 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm29509-201ENSMUST00000185716 321 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm44411-201ENSMUST00000204172 349 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 AC118639.1-203ENSMUST00000228425 2016 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Vps53Q8CCB4 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm15310-201ENSMUST00000117891 372 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm13930-201ENSMUST00000118569 368 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm5166-201ENSMUST00000121332 573 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm17217-201ENSMUST00000166613 469 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm18595-201ENSMUST00000175736 1068 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm24756-201ENSMUST00000177002 96 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm18620-201ENSMUST00000222295 324 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Mir106b-201ENSMUST00000083580 82 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.85□□□□□ -1.15
Vps53Q8CCB4 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms