Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm17177-201ENSMUST00000169144 483 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm28006-201ENSMUST00000183841 122 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Mir6951-201ENSMUST00000183910 75 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm27458-201ENSMUST00000185108 121 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm29389-201ENSMUST00000191562 352 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm43295-201ENSMUST00000201439 412 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm42573-201ENSMUST00000202327 478 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm5314-201ENSMUST00000204852 466 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm19182-201ENSMUST00000207139 577 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 AC153852.1-201ENSMUST00000217881 567 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 AC154371.1-201ENSMUST00000226600 412 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 AC133654.1-201ENSMUST00000228411 672 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm22043-201ENSMUST00000082993 158 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm25582-201ENSMUST00000083412 110 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm26107-201ENSMUST00000083972 107 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim47Q8C0E3 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.47□□□□□ -1.05
Trim47Q8C0E3 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim47Q8C0E3 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC8.46□□□□□ -1.05
Trim47Q8C0E3 AC147639.2-202ENSMUST00000224834 1545 ntBASIC8.46□□□□□ -1.05
Trim47Q8C0E3 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm25725-201ENSMUST00000104528 130 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm12306-201ENSMUST00000117256 171 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm13462-201ENSMUST00000121472 961 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm7991-201ENSMUST00000168668 591 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm18727-201ENSMUST00000185981 553 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm37219-201ENSMUST00000192036 926 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm42753-201ENSMUST00000196718 1268 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm43476-201ENSMUST00000197873 405 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm45269-201ENSMUST00000210359 282 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC102582.1-201ENSMUST00000215376 378 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm19709-201ENSMUST00000215403 482 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC167669.3-201ENSMUST00000224720 393 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC158392.2-201ENSMUST00000225402 969 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms