Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm12229-201ENSMUST00000120487 468 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm24239-201ENSMUST00000157791 255 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm22523-201ENSMUST00000158696 100 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm24735-201ENSMUST00000158859 118 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Mir6940-201ENSMUST00000183447 70 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm28392-201ENSMUST00000077630 393 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Mir296-201ENSMUST00000083587 79 ntBASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp2bQ8BJF9 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.71□□□□□ -1.33
Chmp2bQ8BJF9 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.71□□□□□ -1.33
Chmp2bQ8BJF9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.71□□□□□ -1.33
Chmp2bQ8BJF9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Chmp2bQ8BJF9 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.71□□□□□ -1.33
Chmp2bQ8BJF9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Chmp2bQ8BJF9 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm8624-201ENSMUST00000118083 432 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm14870-201ENSMUST00000118414 156 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm14631-201ENSMUST00000119067 594 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm12104-201ENSMUST00000120359 979 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm22728-201ENSMUST00000158087 129 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm23222-201ENSMUST00000158117 76 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm7651-201ENSMUST00000173398 901 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm25640-201ENSMUST00000175378 125 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Mir7029-201ENSMUST00000184777 61 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm35323-201ENSMUST00000191836 499 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm42558-201ENSMUST00000200982 265 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm44979-201ENSMUST00000206218 287 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm45070-201ENSMUST00000208100 246 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm8275-201ENSMUST00000219732 424 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm4796-201ENSMUST00000219802 624 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Gm7252-201ENSMUST00000223284 456 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Chmp2bQ8BJF9 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms