Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm44624-201ENSMUST00000208700 2278 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm14279-201ENSMUST00000117142 332 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm10243-201ENSMUST00000117571 333 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm12433-201ENSMUST00000119659 255 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm15481-201ENSMUST00000120264 539 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm24773-201ENSMUST00000158513 99 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm7651-201ENSMUST00000173398 901 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm27905-201ENSMUST00000184005 207 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm28980-201ENSMUST00000187877 219 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm28639-201ENSMUST00000191519 481 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm37225-201ENSMUST00000193423 325 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm6522-201ENSMUST00000197160 1203 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm8891-201ENSMUST00000198546 832 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm18410-201ENSMUST00000207199 577 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm18228-201ENSMUST00000217297 1091 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm8275-201ENSMUST00000219732 424 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm45925-202ENSMUST00000219904 1136 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm31711-201ENSMUST00000220687 196 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm37661-201ENSMUST00000191863 1550 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC9.7□□□□□ -0.86
Clcn1Q64347 AC103672.2-201ENSMUST00000228146 1687 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm6493-201ENSMUST00000159889 1786 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm38029-201ENSMUST00000192669 2090 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm37520-201ENSMUST00000194883 2672 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm15110-201ENSMUST00000117545 881 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm5943-201ENSMUST00000119458 459 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm12692-201ENSMUST00000121092 546 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm6327-201ENSMUST00000171185 1335 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm23633-201ENSMUST00000175293 119 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm38173-201ENSMUST00000193126 2314 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm42424-201ENSMUST00000198319 376 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm45446-201ENSMUST00000209348 216 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm45608-201ENSMUST00000210948 389 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm4921-201ENSMUST00000219804 992 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 AC107663.3-201ENSMUST00000225873 601 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 AC106830.2-201ENSMUST00000226624 943 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 AC121114.1-201ENSMUST00000228522 570 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms