Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm23485-201ENSMUST00000104181 155 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm9529-201ENSMUST00000177598 579 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm29240-201ENSMUST00000187248 286 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm9517-201ENSMUST00000195021 874 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm5853-201ENSMUST00000197183 632 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm44374-201ENSMUST00000199821 140 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gm7413-201ENSMUST00000219498 462 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Vps54Q5SPW0 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Pramel-201ENSMUST00000118979 1383 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm14300-201ENSMUST00000120800 946 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm24155-201ENSMUST00000175259 110 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm8506-201ENSMUST00000186661 829 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm7554-201ENSMUST00000202282 574 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm18620-201ENSMUST00000222295 324 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Gm2531-201ENSMUST00000075609 512 ntBASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Vps54Q5SPW0 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm11799-201ENSMUST00000116110 460 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm12653-201ENSMUST00000117778 561 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm12369-201ENSMUST00000121343 942 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm2986-201ENSMUST00000121603 382 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms