Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm11976-201ENSMUST00000119236 295 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Gm14038-201ENSMUST00000121500 807 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Gm14237-201ENSMUST00000122080 430 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Gm43354-201ENSMUST00000196862 346 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Gm31166-201ENSMUST00000209326 288 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Gm45750-201ENSMUST00000211966 354 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sf3b2Q3UJB0 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm26422-201ENSMUST00000104276 132 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm13400-201ENSMUST00000117436 380 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm13641-201ENSMUST00000117993 473 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm25374-201ENSMUST00000158158 101 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm25363-201ENSMUST00000158850 245 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm17217-201ENSMUST00000166613 469 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Mir3062-201ENSMUST00000174986 105 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm38181-201ENSMUST00000181357 720 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm28080-201ENSMUST00000188552 722 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm8419-201ENSMUST00000189886 412 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 AC153800.1-201ENSMUST00000219212 365 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Sf3b2Q3UJB0 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.77□□□□□ -1
Sf3b2Q3UJB0 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Sf3b2Q3UJB0 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.77□□□□□ -1
Sf3b2Q3UJB0 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Sf3b2Q3UJB0 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Sf3b2Q3UJB0 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.77□□□□□ -1
Sf3b2Q3UJB0 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Sf3b2Q3UJB0 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Sf3b2Q3UJB0 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm22426-201ENSMUST00000103811 96 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm5406-201ENSMUST00000120054 766 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm14805-201ENSMUST00000120172 340 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm11848-201ENSMUST00000121207 973 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm27018-201ENSMUST00000181136 225 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm37375-201ENSMUST00000193859 387 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm37385-201ENSMUST00000195223 387 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm29813-201ENSMUST00000195856 447 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm42619-201ENSMUST00000197564 1136 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Gm43798-201ENSMUST00000202056 394 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 CT485607.3-201ENSMUST00000213361 672 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 AC158521.1-202ENSMUST00000224352 645 ntBASIC8.77□□□□□ -1.01
Sf3b2Q3UJB0 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms