Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm37423-201ENSMUST00000194246 3342 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm38697-201ENSMUST00000198061 1746 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm22959-201ENSMUST00000122514 303 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm23280-201ENSMUST00000157905 139 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm19900-201ENSMUST00000207285 576 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 AL591207.2-201ENSMUST00000222991 337 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm28667-201ENSMUST00000189873 2171 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm10286-201ENSMUST00000093603 5077 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm14783-201ENSMUST00000118900 663 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm16285-201ENSMUST00000162999 347 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm23632-201ENSMUST00000175289 125 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Mir6362-201ENSMUST00000184329 107 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm17981-201ENSMUST00000191109 739 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm17997-201ENSMUST00000211801 840 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 AC154481.1-201ENSMUST00000223532 331 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 AC153955.4-201ENSMUST00000217069 2752 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm38387-201ENSMUST00000191945 2577 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 AC174459.1-201ENSMUST00000224476 1943 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm26376-201ENSMUST00000104784 110 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.35□□□□□ -1.71
PrkdcP97313 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Rab26os-201ENSMUST00000176215 477 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm4548-201ENSMUST00000208487 509 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm17766-201ENSMUST00000209223 442 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Gm2607-201ENSMUST00000212389 627 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.35□□□□□ -1.71
PrkdcP97313 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PrkdcP97313 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
PrkdcP97313 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PrkdcP97313 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm43537-201ENSMUST00000199064 3110 ntBASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 130.1 ms