Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm38030-201ENSMUST00000192376 475 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm43546-201ENSMUST00000196721 943 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 Gm42713-201ENSMUST00000202709 945 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm45136-201ENSMUST00000205793 943 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdh11P55288 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 Gm2754-201ENSMUST00000223383 589 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdh11P55288 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdh11P55288 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdh11P55288 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdh11P55288 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdh11P55288 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.06□□□□□ -1.44
Cdh11P55288 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdh11P55288 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Cdh11P55288 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Cdh11P55288 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Mir697-201ENSMUST00000102316 109 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdh11P55288 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Gm13754-201ENSMUST00000120486 998 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Gm22728-201ENSMUST00000158087 129 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm43160-201ENSMUST00000196453 421 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm2221-201ENSMUST00000209342 418 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm5528-201ENSMUST00000076314 480 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdh11P55288 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.05□□□□□ -1.44
Cdh11P55288 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Cdh11P55288 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdh11P55288 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Cdh11P55288 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdh11P55288 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.04□□□□□ -1.44
Cdh11P55288 Thap6-201ENSMUST00000191860 3151 ntBASIC6.04□□□□□ -1.44
Cdh11P55288 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdh11P55288 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdh11P55288 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdh11P55288 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdh11P55288 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdh11P55288 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdh11P55288 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdh11P55288 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdh11P55288 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdh11P55288 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdh11P55288 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 161 ms