Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Sox3P53784 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sox3P53784 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.44□□□□□ -1.38
Sox3P53784 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Sox3P53784 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox3P53784 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Sox3P53784 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sox3P53784 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.44□□□□□ -1.38
Sox3P53784 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox3P53784 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox3P53784 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.44□□□□□ -1.38
Sox3P53784 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox3P53784 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.44□□□□□ -1.38
Sox3P53784 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sox3P53784 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox3P53784 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox3P53784 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm15216-201ENSMUST00000118058 277 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Gm15181-201ENSMUST00000120142 177 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Gm14796-201ENSMUST00000121216 959 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Gm11257-201ENSMUST00000121313 315 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Gm11879-201ENSMUST00000121885 702 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Gm5401-201ENSMUST00000122444 365 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Gm25387-201ENSMUST00000157813 132 ntBASIC6.43□□□□□ -1.38
Sox3P53784 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.43□□□□□ -1.38
Sox3P53784 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox3P53784 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Sox3P53784 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm45739-201ENSMUST00000213094 388 ntBASIC6.43□□□□□ -1.38
Sox3P53784 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.43□□□□□ -1.38
Sox3P53784 Gm5928-201ENSMUST00000221839 466 ntBASIC6.43□□□□□ -1.38
Sox3P53784 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.43□□□□□ -1.38
Sox3P53784 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox3P53784 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox3P53784 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.43□□□□□ -1.38
Sox3P53784 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox3P53784 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.43□□□□□ -1.38
Sox3P53784 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox3P53784 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Cmah-208ENSMUST00000224819 9482 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm14158-201ENSMUST00000118409 308 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm4911-201ENSMUST00000119388 945 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm11198-201ENSMUST00000119771 974 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm13991-201ENSMUST00000120190 648 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox3P53784 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox3P53784 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm20401-201ENSMUST00000173717 212 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm37328-201ENSMUST00000193191 640 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm10416-201ENSMUST00000197379 645 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm5711-201ENSMUST00000197896 421 ntBASIC6.42□□□□□ -1.38
Sox3P53784 Gm43945-201ENSMUST00000203595 754 ntBASIC6.42□□□□□ -1.38
Sox3P53784 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox3P53784 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.42□□□□□ -1.38
Sox3P53784 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms