Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.52□□□□□ -1.05
Rfx1P48377 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 AC122295.1-201ENSMUST00000223476 388 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 CT033778.1-201ENSMUST00000224767 767 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Rfx1P48377 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
Rfx1P48377 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Rfx1P48377 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Rfx1P48377 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm11928-201ENSMUST00000119323 437 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm16053-201ENSMUST00000120511 188 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm23657-201ENSMUST00000122623 294 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm15878-201ENSMUST00000127561 306 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Rfx1P48377 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.51□□□□□ -1.05
Rfx1P48377 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm15251-201ENSMUST00000177947 883 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm29355-201ENSMUST00000188178 697 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm28953-201ENSMUST00000188336 697 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm20788-201ENSMUST00000190538 697 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm43004-201ENSMUST00000201872 703 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm5995-201ENSMUST00000204107 1273 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Gm44566-201ENSMUST00000207638 304 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.51□□□□□ -1.05
Rfx1P48377 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm5080-201ENSMUST00000220341 743 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 AC140210.1-201ENSMUST00000224961 534 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Rfx1P48377 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.51□□□□□ -1.05
Rfx1P48377 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.51□□□□□ -1.05
Rfx1P48377 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Rfx1P48377 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.5□□□□□ -1.05
Rfx1P48377 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm10845-202ENSMUST00000228217 3389 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm23485-201ENSMUST00000104181 155 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm11105-201ENSMUST00000112781 478 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Rfx1P48377 Gm8812-201ENSMUST00000118496 412 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Defa-ps10-201ENSMUST00000121649 171 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm14830-201ENSMUST00000121899 700 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.5□□□□□ -1.05
Rfx1P48377 Gm11203-201ENSMUST00000122169 741 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms