Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.64□□□□□ -1.51
Cd28P31041 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cd28P31041 Gm37863-201ENSMUST00000194911 1457 ntBASIC5.64□□□□□ -1.51
Cd28P31041 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cd28P31041 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Cd28P31041 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm13900-201ENSMUST00000119402 498 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm14070-201ENSMUST00000120773 428 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm8089-201ENSMUST00000122463 968 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm6081-201ENSMUST00000134472 489 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm23954-201ENSMUST00000157213 353 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm9064-201ENSMUST00000163579 566 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm3760-201ENSMUST00000167475 804 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm26587-201ENSMUST00000180795 989 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Cd28P31041 Ighv1-38-201ENSMUST00000192755 349 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm37511-201ENSMUST00000192901 294 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm45100-201ENSMUST00000209153 391 ntBASIC5.63□□□□□ -1.51
Cd28P31041 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.63□□□□□ -1.51
Cd28P31041 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.63□□□□□ -1.51
Cd28P31041 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC5.63□□□□□ -1.51
Cd28P31041 AC160112.1-201ENSMUST00000219139 714 ntBASIC5.63□□□□□ -1.51
Cd28P31041 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC5.63□□□□□ -1.51
Cd28P31041 CT009546.3-201ENSMUST00000220914 208 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Gm7252-201ENSMUST00000223284 456 ntBASIC5.63□□□□□ -1.51
Cd28P31041 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.63□□□□□ -1.51
Cd28P31041 AC158531.2-201ENSMUST00000224264 473 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cd28P31041 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.63□□□□□ -1.51
Cd28P31041 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Gm5605-201ENSMUST00000208940 1305 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cd28P31041 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cd28P31041 Gm44441-201ENSMUST00000203642 2475 ntBASIC5.63□□□□□ -1.51
Cd28P31041 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.63□□□□□ -1.51
Cd28P31041 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.62□□□□□ -1.51
Cd28P31041 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.62□□□□□ -1.51
Cd28P31041 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.62□□□□□ -1.51
Cd28P31041 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cd28P31041 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cd28P31041 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.62□□□□□ -1.51
Cd28P31041 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Cd28P31041 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.62□□□□□ -1.51
Cd28P31041 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cd28P31041 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cd28P31041 Gm12075-201ENSMUST00000117426 397 ntBASIC5.62□□□□□ -1.51
Cd28P31041 Gm15105-201ENSMUST00000117777 204 ntBASIC5.62□□□□□ -1.51
Cd28P31041 Gm12072-201ENSMUST00000118293 715 ntBASIC5.62□□□□□ -1.51
Cd28P31041 Gm11925-201ENSMUST00000121375 535 ntBASIC5.62□□□□□ -1.51
Cd28P31041 Gm11954-201ENSMUST00000121403 349 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms