Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 CT030238.3-201ENSMUST00000227352 875 ntBASIC5.87□□□□□ -1.47
P20040 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.87□□□□□ -1.47
P20040 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
P20040 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
P20040 Gm23238-201ENSMUST00000083007 164 ntBASIC5.87□□□□□ -1.47
P20040 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.87□□□□□ -1.47
P20040 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.87□□□□□ -1.47
P20040 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.87□□□□□ -1.47
P20040 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
P20040 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
P20040 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.87□□□□□ -1.47
P20040 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
P20040 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
P20040 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.86□□□□□ -1.47
P20040 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.86□□□□□ -1.47
P20040 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
P20040 Gm37863-201ENSMUST00000194911 1457 ntBASIC5.86□□□□□ -1.47
P20040 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
P20040 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Gm26645-201ENSMUST00000181076 1316 ntBASIC5.86□□□□□ -1.47
P20040 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.86□□□□□ -1.47
P20040 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.86□□□□□ -1.47
P20040 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
P20040 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC5.86□□□□□ -1.47
P20040 Gm6987-201ENSMUST00000119319 428 ntBASIC5.86□□□□□ -1.47
P20040 Gm7746-201ENSMUST00000120966 503 ntBASIC5.86□□□□□ -1.47
P20040 Gm15242-201ENSMUST00000122459 283 ntBASIC5.86□□□□□ -1.47
P20040 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.86□□□□□ -1.47
P20040 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
P20040 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.86□□□□□ -1.47
P20040 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.86□□□□□ -1.47
P20040 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.86□□□□□ -1.47
P20040 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.86□□□□□ -1.47
P20040 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.86□□□□□ -1.47
P20040 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
P20040 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
P20040 Gm3549-201ENSMUST00000203873 794 ntBASIC5.86□□□□□ -1.47
P20040 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC5.86□□□□□ -1.47
P20040 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 AC153847.1-201ENSMUST00000214524 353 ntBASIC5.86□□□□□ -1.47
P20040 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
P20040 Gm3678-201ENSMUST00000218888 492 ntBASIC5.86□□□□□ -1.47
P20040 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.86□□□□□ -1.47
P20040 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.86□□□□□ -1.47
P20040 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.86□□□□□ -1.47
P20040 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
P20040 Gm25587-201ENSMUST00000082498 166 ntBASIC5.86□□□□□ -1.47
P20040 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
P20040 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.86□□□□□ -1.47
P20040 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
P20040 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
P20040 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.86□□□□□ -1.47
P20040 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P20040 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.86□□□□□ -1.47
P20040 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.85□□□□□ -1.47
P20040 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.85□□□□□ -1.47
P20040 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P20040 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
P20040 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
P20040 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P20040 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
P20040 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P20040 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
P20040 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.85□□□□□ -1.47
P20040 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.85□□□□□ -1.47
P20040 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P20040 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P20040 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.85□□□□□ -1.47
P20040 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.85□□□□□ -1.47
P20040 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.85□□□□□ -1.47
P20040 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
P20040 Gm13469-201ENSMUST00000118231 350 ntBASIC5.85□□□□□ -1.47
P20040 Gm14466-201ENSMUST00000119028 451 ntBASIC5.85□□□□□ -1.47
P20040 Gm11498-201ENSMUST00000120660 949 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms