Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm11688-201ENSMUST00000122145 308 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm22276-201ENSMUST00000122469 129 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm26167-201ENSMUST00000158423 253 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm17121-201ENSMUST00000170414 847 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Olfr331-202ENSMUST00000170501 957 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm9399-201ENSMUST00000175771 639 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm17222-201ENSMUST00000180135 847 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm28070-201ENSMUST00000191502 445 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm2505-201ENSMUST00000200413 825 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm42959-201ENSMUST00000202184 212 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm5307-201ENSMUST00000204772 760 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm18940-201ENSMUST00000222518 871 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm22504-201ENSMUST00000082963 139 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sdc1P18828 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Sdc1P18828 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm11880-201ENSMUST00000117612 399 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Gm13254-201ENSMUST00000118295 654 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 n-R5s76-201ENSMUST00000122700 113 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC5.28□□□□□ -1.56
Sdc1P18828 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.28□□□□□ -1.56
Sdc1P18828 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm22763-201ENSMUST00000158374 107 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm23162-201ENSMUST00000175081 121 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Gm5283-201ENSMUST00000177874 334 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm20111-201ENSMUST00000184830 319 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC5.28□□□□□ -1.56
Sdc1P18828 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC5.28□□□□□ -1.56
Sdc1P18828 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Olfr683-201ENSMUST00000061284 960 ntBASIC5.28□□□□□ -1.56
Sdc1P18828 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sdc1P18828 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sdc1P18828 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sdc1P18828 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms