Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm22707-201ENSMUST00000103834 110 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm22439-201ENSMUST00000104048 132 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm7803-201ENSMUST00000117176 1015 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm11558-201ENSMUST00000118454 459 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm15665-201ENSMUST00000119116 847 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm12817-201ENSMUST00000119622 610 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm8916-201ENSMUST00000119732 949 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm15049-201ENSMUST00000120474 463 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm15160-201ENSMUST00000120553 907 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm15843-201ENSMUST00000146593 529 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm24782-201ENSMUST00000157641 132 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm6726-201ENSMUST00000172786 681 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm23139-201ENSMUST00000179454 132 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm28801-201ENSMUST00000188761 449 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm5244-202ENSMUST00000189517 743 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm37678-201ENSMUST00000192908 1146 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm43595-201ENSMUST00000196464 1071 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm26413-202ENSMUST00000198972 127 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm17918-201ENSMUST00000205315 574 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm30196-201ENSMUST00000208957 160 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm7394-201ENSMUST00000209138 1032 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm17950-201ENSMUST00000214617 646 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 AC153937.1-201ENSMUST00000218734 412 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 AC157571.1-201ENSMUST00000222014 520 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 AC118006.3-201ENSMUST00000223948 1176 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hmgb3O54879 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm23529-201ENSMUST00000104562 132 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm13163-201ENSMUST00000119875 336 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm11838-201ENSMUST00000121999 231 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm26480-201ENSMUST00000122619 297 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm11545-201ENSMUST00000146507 375 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm17047-201ENSMUST00000167709 430 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm9274-201ENSMUST00000182505 984 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm21301-201ENSMUST00000189476 699 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm37383-201ENSMUST00000191750 745 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm38164-201ENSMUST00000192810 330 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm45198-201ENSMUST00000206796 591 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm2221-201ENSMUST00000209342 418 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms