Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm42799-201ENSMUST00000201331 328 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm17918-201ENSMUST00000205315 574 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm11976-201ENSMUST00000119236 295 ntBASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm37463-201ENSMUST00000193819 796 ntBASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 AC155941.1-201ENSMUST00000220223 529 ntBASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm37254-201ENSMUST00000193542 3901 ntBASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gm5702-201ENSMUST00000185629 2469 ntBASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc180J3QNE4 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm43019-201ENSMUST00000196948 2863 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm23440-201ENSMUST00000104299 130 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm22132-201ENSMUST00000175316 100 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm27970-201ENSMUST00000184854 407 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm37072-201ENSMUST00000194570 837 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Igkv12-67-201ENSMUST00000197806 354 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Gm12388-201ENSMUST00000119112 1887 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccdc180J3QNE4 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Calr-ps-201ENSMUST00000121776 485 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm24395-201ENSMUST00000158139 125 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm29519-201ENSMUST00000186994 398 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm28112-201ENSMUST00000190898 1875 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm17824-201ENSMUST00000197690 805 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 AC154250.1-201ENSMUST00000224775 489 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 AC116591.1-201ENSMUST00000227919 351 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm45250-201ENSMUST00000209414 3592 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms