Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm26162-201ENSMUST00000157793 132 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Mir3572-201ENSMUST00000175549 86 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm28353-201ENSMUST00000186482 570 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm28533-201ENSMUST00000186741 570 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a4A2AX52 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a4A2AX52 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.59□□□□□ -1.52
Col6a4A2AX52 Gm21152-201ENSMUST00000190271 3483 ntBASIC5.59□□□□□ -1.52
Col6a4A2AX52 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a4A2AX52 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm11853-201ENSMUST00000119687 1384 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm16179-201ENSMUST00000120685 373 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Mir6986-201ENSMUST00000184483 58 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm28934-201ENSMUST00000186491 346 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm45122-201ENSMUST00000206376 784 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm18805-201ENSMUST00000206872 655 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm19212-201ENSMUST00000216642 862 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm9269-201ENSMUST00000221661 578 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 CT009713.5-201ENSMUST00000224508 909 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 AC156645.1-201ENSMUST00000223066 5194 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm12193-201ENSMUST00000117250 379 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm16200-201ENSMUST00000120385 331 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm25363-201ENSMUST00000158850 245 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm8009-201ENSMUST00000191672 436 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm44823-201ENSMUST00000204775 1107 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm7802-201ENSMUST00000216464 262 ntBASIC5.58□□□□□ -1.52
Col6a4A2AX52 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a4A2AX52 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm29670-201ENSMUST00000190228 2491 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm37372-201ENSMUST00000193577 3311 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm44185-201ENSMUST00000204539 3307 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
Col6a4A2AX52 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a4A2AX52 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.57□□□□□ -1.52
Col6a4A2AX52 Gm24065-201ENSMUST00000157487 264 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 264.9 ms