Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 AC155709.1-201ENSMUST00000218794 162 ntBASIC5.59□□□□□ -1.51
Gm3550W4VSN7 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.59□□□□□ -1.51
Gm3550W4VSN7 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.59□□□□□ -1.51
Gm3550W4VSN7 AC133958.1-201ENSMUST00000227085 961 ntBASIC5.59□□□□□ -1.51
Gm3550W4VSN7 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3550W4VSN7 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.59□□□□□ -1.51
Gm3550W4VSN7 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3550W4VSN7 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Gm3550W4VSN7 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3550W4VSN7 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Gm3550W4VSN7 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3550W4VSN7 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Gm3550W4VSN7 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm23748-201ENSMUST00000104227 131 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm23077-201ENSMUST00000157854 116 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm20549-201ENSMUST00000174804 429 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm20615-201ENSMUST00000177503 705 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm42782-201ENSMUST00000197286 522 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm8182-201ENSMUST00000197863 769 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm5711-201ENSMUST00000197896 421 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm9419-201ENSMUST00000200672 567 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm17822-201ENSMUST00000204307 351 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm38430-201ENSMUST00000209888 1240 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC124184.1-201ENSMUST00000218167 283 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 CT009515.1-201ENSMUST00000228127 586 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3550W4VSN7 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.57□□□□□ -1.52
Gm3550W4VSN7 AC159624.1-201ENSMUST00000217762 1344 ntBASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Gm26079-201ENSMUST00000104066 133 ntBASIC5.57□□□□□ -1.52
Gm3550W4VSN7 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms