Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm25550-201ENSMUST00000158079 128 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm16297-201ENSMUST00000161466 459 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm18352-201ENSMUST00000189113 902 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm44892-201ENSMUST00000208595 488 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm45626-201ENSMUST00000210093 361 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upk3aQ9JKX8 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm13455-201ENSMUST00000118767 517 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm13604-201ENSMUST00000119332 482 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm13357-201ENSMUST00000120528 537 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm23259-201ENSMUST00000158318 303 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm3140-201ENSMUST00000163523 481 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm9529-201ENSMUST00000177598 579 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm23011-202ENSMUST00000197855 275 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm44279-201ENSMUST00000205154 472 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm2767-201ENSMUST00000209582 473 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm8607-201ENSMUST00000221864 431 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upk3aQ9JKX8 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Upk3aQ9JKX8 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.34□□□□□ -1.4
Upk3aQ9JKX8 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Upk3aQ9JKX8 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Upk3aQ9JKX8 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Upk3aQ9JKX8 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.33□□□□□ -1.4
Upk3aQ9JKX8 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms