Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm38374-201ENSMUST00000194417 2033 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm22760-201ENSMUST00000102277 93 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm14519-201ENSMUST00000118490 312 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm16463-201ENSMUST00000120527 721 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm15381-201ENSMUST00000121501 1156 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm12368-201ENSMUST00000122251 434 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm6568-201ENSMUST00000122274 697 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm24198-201ENSMUST00000157812 108 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Atp2b4-208ENSMUST00000167348 243 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm29453-201ENSMUST00000186428 1279 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Ighv5-1-201ENSMUST00000193324 353 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm6375-201ENSMUST00000205201 1145 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm8171-201ENSMUST00000217443 720 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AV026068-218ENSMUST00000223980 575 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AV026068-219ENSMUST00000224148 933 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 AV026068-220ENSMUST00000224153 1147 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 CT030238.4-201ENSMUST00000228579 801 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm26063-201ENSMUST00000083378 107 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Gm18493-201ENSMUST00000192084 1612 ntBASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim42Q9D2H5 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim42Q9D2H5 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms