Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.98□□□□□ -1.29
CopaQ8CIE6 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.98□□□□□ -1.29
CopaQ8CIE6 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm25093-201ENSMUST00000103993 132 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm24519-201ENSMUST00000104507 132 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm12468-201ENSMUST00000116189 404 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm12740-201ENSMUST00000118794 308 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Mir7033-201ENSMUST00000184259 81 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29048-201ENSMUST00000185342 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29403-201ENSMUST00000185491 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28234-201ENSMUST00000185657 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28248-201ENSMUST00000186093 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29633-202ENSMUST00000186217 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28829-201ENSMUST00000186231 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28261-201ENSMUST00000186417 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28815-201ENSMUST00000186751 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28608-201ENSMUST00000186860 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28122-201ENSMUST00000187088 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28420-201ENSMUST00000187340 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28106-201ENSMUST00000187640 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28698-201ENSMUST00000187734 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29224-201ENSMUST00000187965 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29189-201ENSMUST00000188018 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29476-201ENSMUST00000188397 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29505-201ENSMUST00000188424 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28125-201ENSMUST00000188470 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28117-201ENSMUST00000188472 371 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29391-201ENSMUST00000188545 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29280-201ENSMUST00000188571 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28349-201ENSMUST00000188590 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29652-201ENSMUST00000188622 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28819-206ENSMUST00000188816 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29079-201ENSMUST00000188875 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28213-201ENSMUST00000189183 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29382-201ENSMUST00000189549 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29377-205ENSMUST00000189603 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28327-201ENSMUST00000189638 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28790-201ENSMUST00000189642 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28907-201ENSMUST00000189700 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29586-207ENSMUST00000189745 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29115-201ENSMUST00000189870 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28366-201ENSMUST00000190147 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29212-201ENSMUST00000190384 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29533-201ENSMUST00000190403 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28162-201ENSMUST00000190545 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29030-201ENSMUST00000190848 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28742-201ENSMUST00000191001 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28899-201ENSMUST00000191161 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29567-201ENSMUST00000191188 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28222-201ENSMUST00000191210 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28776-201ENSMUST00000191282 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29306-201ENSMUST00000191366 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29618-201ENSMUST00000191423 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28136-210ENSMUST00000191432 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm29251-201ENSMUST00000191480 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm28658-201ENSMUST00000191532 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm32180-201ENSMUST00000192415 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm30598-201ENSMUST00000192620 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm37627-201ENSMUST00000194585 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm34274-201ENSMUST00000195825 615 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm44227-201ENSMUST00000203576 241 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.97□□□□□ -1.29
CopaQ8CIE6 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.97□□□□□ -1.29
CopaQ8CIE6 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 376.6 ms