Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc28aQ8CEI3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm13983-201ENSMUST00000118018 865 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm11689-201ENSMUST00000120766 302 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm22035-201ENSMUST00000157284 228 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm9064-201ENSMUST00000163579 566 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm7393-201ENSMUST00000172650 739 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm37103-201ENSMUST00000191830 115 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm8182-201ENSMUST00000197863 769 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm5711-201ENSMUST00000197896 421 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm43377-201ENSMUST00000201640 455 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm4605-201ENSMUST00000203148 625 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm5027-201ENSMUST00000206700 375 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm2225-201ENSMUST00000209570 377 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm9293-201ENSMUST00000223096 306 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28aQ8CEI3 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.84□□□□□ -1.32
Ccdc28aQ8CEI3 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Ccdc28aQ8CEI3 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ccdc28aQ8CEI3 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Ccdc28aQ8CEI3 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms