Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lrif1Q8CDD9 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm22707-201ENSMUST00000103834 110 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm25498-201ENSMUST00000104424 129 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm12535-201ENSMUST00000121025 484 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm12094-201ENSMUST00000121781 472 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm8577-201ENSMUST00000122420 986 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm26480-201ENSMUST00000122619 297 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Mir6241-201ENSMUST00000184225 103 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm29650-201ENSMUST00000188485 742 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm35638-201ENSMUST00000220724 652 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm18601-201ENSMUST00000220831 634 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm9985-201ENSMUST00000044101 510 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm28392-201ENSMUST00000077630 393 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lrif1Q8CDD9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm26079-201ENSMUST00000104066 133 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm11689-201ENSMUST00000120766 302 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm15187-201ENSMUST00000122329 264 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Mir1930-201ENSMUST00000158799 84 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm16138-201ENSMUST00000159341 821 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm16297-201ENSMUST00000161466 459 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm3585-201ENSMUST00000173438 875 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm9167-201ENSMUST00000182469 962 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm18352-201ENSMUST00000189113 902 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 AV026068-218ENSMUST00000223980 575 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm23734-201ENSMUST00000083753 109 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm6419-201ENSMUST00000097166 429 ntBASIC6.51□□□□□ -1.37
Lrif1Q8CDD9 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms