Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 AC164437.5-201ENSMUST00000227235 4414 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm15903-202ENSMUST00000199631 3518 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm13890-201ENSMUST00000117578 390 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm22548-201ENSMUST00000174899 78 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm44265-201ENSMUST00000203631 465 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm18592-201ENSMUST00000221529 276 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm18194-202ENSMUST00000210952 3442 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Mir700-201ENSMUST00000102169 79 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm22210-201ENSMUST00000158101 144 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Mir5112-201ENSMUST00000174897 60 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm28023-201ENSMUST00000184556 60 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm27825-201ENSMUST00000184586 60 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm37380-201ENSMUST00000193752 397 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm4332-201ENSMUST00000196114 346 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm43212-201ENSMUST00000198208 394 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm43054-201ENSMUST00000199495 884 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm44312-201ENSMUST00000203536 469 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm10688-201ENSMUST00000214985 520 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 AC156025.3-201ENSMUST00000225919 3095 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm42462-201ENSMUST00000196543 1363 ntBASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a6Q8C6K9 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm15621-201ENSMUST00000119162 364 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm8192-201ENSMUST00000182196 958 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm43215-201ENSMUST00000199108 252 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm25515-201ENSMUST00000083858 157 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm5182-201ENSMUST00000217708 6092 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms