Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm24383-201ENSMUST00000122691 333 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm16285-201ENSMUST00000162999 347 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm18352-201ENSMUST00000189113 902 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm37372-201ENSMUST00000193577 3311 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm37380-201ENSMUST00000193752 397 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm4083-201ENSMUST00000207158 451 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm46364-201ENSMUST00000218548 319 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Olfr923-204ENSMUST00000219798 1068 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 AC154612.1-202ENSMUST00000224806 1725 ntBASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp40Q8BWR4 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Rian-209ENSMUST00000182406 3476 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm25346-201ENSMUST00000104509 128 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm11510-201ENSMUST00000120278 347 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm12630-201ENSMUST00000121575 784 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm28996-201ENSMUST00000190316 721 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm17918-201ENSMUST00000205315 574 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm8667-201ENSMUST00000211112 449 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 AC157085.1-201ENSMUST00000216343 162 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm6436-201ENSMUST00000077163 451 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm37457-201ENSMUST00000193639 2433 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm43557-201ENSMUST00000197100 2370 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.17□□□□□ -0.94
Usp40Q8BWR4 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm42763-201ENSMUST00000199595 2087 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Grik1-210ENSMUST00000228034 2708 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm10693-201ENSMUST00000144146 2037 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm26079-201ENSMUST00000104066 133 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm11902-201ENSMUST00000118849 270 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm12438-201ENSMUST00000122034 336 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm22820-201ENSMUST00000157205 329 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm25219-201ENSMUST00000157545 330 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm28918-201ENSMUST00000188822 699 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm37024-201ENSMUST00000192224 868 ntBASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp40Q8BWR4 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms