Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm16297-201ENSMUST00000161466 459 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm26335-201ENSMUST00000178449 107 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm28859-201ENSMUST00000186650 616 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm7436-201ENSMUST00000187229 391 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm29545-201ENSMUST00000188878 694 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm42976-201ENSMUST00000200313 222 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm7239-201ENSMUST00000220981 860 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 AC211878.5-201ENSMUST00000221697 409 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 AC154573.2-201ENSMUST00000224174 378 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 AC160930.1-201ENSMUST00000227194 337 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm38104-201ENSMUST00000195121 1895 ntBASIC9.72□□□□□ -0.85
Clcn1Q64347 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Clcn1Q64347 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clcn1Q64347 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Clcn1Q64347 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Clcn1Q64347 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Clcn1Q64347 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC9.71□□□□□ -0.85
Clcn1Q64347 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clcn1Q64347 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm23701-201ENSMUST00000103893 110 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm23323-201ENSMUST00000104471 133 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Mup-ps16-201ENSMUST00000120085 596 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm16053-201ENSMUST00000120511 188 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm11385-201ENSMUST00000121513 570 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm14979-201ENSMUST00000121561 1035 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm23533-201ENSMUST00000157540 245 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm25180-201ENSMUST00000157746 115 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Mir5101-201ENSMUST00000175181 83 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm18848-201ENSMUST00000182069 792 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm44590-201ENSMUST00000206161 391 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC9.71□□□□□ -0.86
Clcn1Q64347 AC116656.1-201ENSMUST00000227040 755 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm5182-201ENSMUST00000217708 6092 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm10259-201ENSMUST00000091289 1590 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Gm43917-201ENSMUST00000191984 2360 ntBASIC9.71□□□□□ -0.86
Clcn1Q64347 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clcn1Q64347 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Clcn1Q64347 Gm37262-201ENSMUST00000192816 1818 ntBASIC9.7□□□□□ -0.86
Clcn1Q64347 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clcn1Q64347 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms