Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Upf3bQ3ULL6 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.09□□□□□ -1.27
Upf3bQ3ULL6 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.28
Upf3bQ3ULL6 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm16073-201ENSMUST00000116032 517 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm14614-201ENSMUST00000119873 384 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm7613-201ENSMUST00000139070 487 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm4997-201ENSMUST00000154056 360 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm3585-201ENSMUST00000173438 875 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm10136-201ENSMUST00000183196 435 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm7019-201ENSMUST00000194122 369 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm43203-201ENSMUST00000200130 558 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm17997-201ENSMUST00000211801 840 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm6575-201ENSMUST00000222946 697 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Upf3bQ3ULL6 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm12842-201ENSMUST00000117298 476 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm14038-201ENSMUST00000121500 807 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm14847-201ENSMUST00000121978 519 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Mir1907-201ENSMUST00000122509 90 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Mir3060-201ENSMUST00000175339 83 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm19815-201ENSMUST00000175818 335 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm27295-201ENSMUST00000184264 153 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm37439-201ENSMUST00000193150 856 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm43383-201ENSMUST00000195981 469 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm43459-201ENSMUST00000202093 331 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm30708-201ENSMUST00000202183 312 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm43867-201ENSMUST00000203860 525 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm32983-201ENSMUST00000208500 505 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Gm9267-201ENSMUST00000222831 404 ntBASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Upf3bQ3ULL6 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms