Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm14038-201ENSMUST00000121500 807 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm25617-201ENSMUST00000179548 133 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Mir6921-201ENSMUST00000183719 80 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm43546-201ENSMUST00000196721 943 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm25617-202ENSMUST00000198387 132 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm30708-201ENSMUST00000202183 312 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm42713-201ENSMUST00000202709 945 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm45136-201ENSMUST00000205793 943 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm2975-201ENSMUST00000209710 820 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm17849-201ENSMUST00000219788 853 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm35619-201ENSMUST00000222548 600 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Trafd1Q3UDK1 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm22710-201ENSMUST00000116892 125 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm15310-201ENSMUST00000117891 372 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm12229-201ENSMUST00000120487 468 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm14070-201ENSMUST00000120773 428 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm14353-201ENSMUST00000122200 869 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Gm24176-201ENSMUST00000158928 121 ntBASIC6.57□□□□□ -1.36
Trafd1Q3UDK1 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms