Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm23077-201ENSMUST00000157854 116 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm22569-201ENSMUST00000175545 124 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm24756-201ENSMUST00000177002 96 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm29650-201ENSMUST00000188485 742 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm44225-201ENSMUST00000203582 186 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm44112-201ENSMUST00000204787 372 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm26417-201ENSMUST00000104274 135 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm25344-201ENSMUST00000104503 132 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm22710-201ENSMUST00000116892 125 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm13207-201ENSMUST00000119862 773 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm12104-201ENSMUST00000120359 979 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm26183-201ENSMUST00000157685 139 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Mir1929-201ENSMUST00000158635 93 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm26025-201ENSMUST00000158655 271 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm8506-201ENSMUST00000186661 829 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm43595-201ENSMUST00000196464 1071 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm44892-201ENSMUST00000208595 488 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 AC122539.1-201ENSMUST00000219925 329 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7□□□□□ -1.29
Trim43aQ3TL54 AC115304.1-202ENSMUST00000226850 837 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 AC116319.2-201ENSMUST00000228159 984 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm23734-201ENSMUST00000083753 109 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm44215-201ENSMUST00000204910 2711 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim43aQ3TL54 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7□□□□□ -1.29
Trim43aQ3TL54 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim43aQ3TL54 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Gm11976-201ENSMUST00000119236 295 ntBASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Gm15081-201ENSMUST00000119794 844 ntBASIC6.99□□□□□ -1.29
Trim43aQ3TL54 Gm12229-201ENSMUST00000120487 468 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms