Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm15422-201ENSMUST00000117453 541 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm11997-201ENSMUST00000118697 313 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm15019-201ENSMUST00000120148 434 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm14414-201ENSMUST00000120833 573 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm11965-201ENSMUST00000122017 277 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Klra11-ps-201ENSMUST00000122033 810 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Scarna17-201ENSMUST00000158064 79 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm25265-201ENSMUST00000158520 347 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm18191-201ENSMUST00000174624 824 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Mir6999-201ENSMUST00000183498 61 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm38063-201ENSMUST00000193990 342 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm37349-201ENSMUST00000194205 624 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm9245-201ENSMUST00000200528 983 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm17984-201ENSMUST00000205286 859 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC6.6□□□□□ -1.35
Sf3b6P59708 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 AC139845.2-201ENSMUST00000227504 436 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 CT009550.3-201ENSMUST00000228542 455 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm25135-201ENSMUST00000082648 143 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sf3b6P59708 AC122357.2-201ENSMUST00000220732 1525 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.6□□□□□ -1.35
Sf3b6P59708 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sf3b6P59708 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Sf3b6P59708 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sf3b6P59708 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.59□□□□□ -1.35
Sf3b6P59708 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sf3b6P59708 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sf3b6P59708 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.59□□□□□ -1.35
Sf3b6P59708 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.59□□□□□ -1.35
Sf3b6P59708 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Mir582-201ENSMUST00000103758 81 ntBASIC6.59□□□□□ -1.35
Sf3b6P59708 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sf3b6P59708 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sf3b6P59708 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC6.59□□□□□ -1.35
Sf3b6P59708 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Sf3b6P59708 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Sf3b6P59708 Gm13325-201ENSMUST00000118746 806 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms