Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm14847-201ENSMUST00000121978 519 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm12175-201ENSMUST00000122081 345 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm12591-201ENSMUST00000122407 1177 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm24382-201ENSMUST00000122698 107 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm22985-201ENSMUST00000122754 116 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC7.22□□□□□ -1.25
Shmt1P50431 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm16571-201ENSMUST00000159112 291 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm22923-201ENSMUST00000174952 110 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm43772-201ENSMUST00000202052 379 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm44213-201ENSMUST00000204977 703 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm44833-201ENSMUST00000208368 331 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm7588-201ENSMUST00000216866 571 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.22□□□□□ -1.25
Shmt1P50431 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Shmt1P50431 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Shmt1P50431 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.22□□□□□ -1.25
Shmt1P50431 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.25
Shmt1P50431 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Shmt1P50431 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Shmt1P50431 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.21□□□□□ -1.25
Shmt1P50431 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.25
Shmt1P50431 Gm18300-201ENSMUST00000192792 1406 ntBASIC7.21□□□□□ -1.25
Shmt1P50431 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Shmt1P50431 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm16073-201ENSMUST00000116032 517 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm12653-201ENSMUST00000117778 561 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm11370-201ENSMUST00000120583 260 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.21□□□□□ -1.26
Shmt1P50431 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm23116-201ENSMUST00000158481 67 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm25717-201ENSMUST00000158631 353 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.21□□□□□ -1.26
Shmt1P50431 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm27186-201ENSMUST00000184223 307 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm18348-201ENSMUST00000191227 820 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm6140-201ENSMUST00000192494 966 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm7019-201ENSMUST00000194122 369 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm37845-201ENSMUST00000194977 355 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm5711-201ENSMUST00000197896 421 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm43867-201ENSMUST00000203860 525 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm43946-201ENSMUST00000204058 886 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Gm9240-201ENSMUST00000206527 742 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.21□□□□□ -1.26
Shmt1P50431 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Shmt1P50431 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Shmt1P50431 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Shmt1P50431 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Shmt1P50431 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.21□□□□□ -1.26
Shmt1P50431 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
Shmt1P50431 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Shmt1P50431 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.2□□□□□ -1.26
Shmt1P50431 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Shmt1P50431 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms