Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.44□□□□□ -1.22
Brca1P48754 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Brca1P48754 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm16074-201ENSMUST00000119524 444 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm16269-201ENSMUST00000160532 409 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm9597-201ENSMUST00000171913 602 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC7.43□□□□□ -1.22
Brca1P48754 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.43□□□□□ -1.22
Brca1P48754 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.43□□□□□ -1.22
Brca1P48754 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.43□□□□□ -1.22
Brca1P48754 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Brca1P48754 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Gm15073-201ENSMUST00000117432 634 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm14512-201ENSMUST00000117924 230 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm22820-201ENSMUST00000157205 329 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC7.43□□□□□ -1.22
Brca1P48754 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm2225-201ENSMUST00000209570 377 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm36262-201ENSMUST00000223274 499 ntBASIC7.43□□□□□ -1.22
Brca1P48754 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.43□□□□□ -1.22
Brca1P48754 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Gm16335-201ENSMUST00000077495 309 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.43□□□□□ -1.22
Brca1P48754 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Brca1P48754 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Brca1P48754 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brca1P48754 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Brca1P48754 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 AC112142.1-203ENSMUST00000228670 2472 ntBASIC7.42□□□□□ -1.22
Brca1P48754 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Brca1P48754 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms