Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm44800-201ENSMUST00000207510 1855 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.53□□□□□ -1.04
Rfx1P48377 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm19210-201ENSMUST00000199562 1350 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm23276-201ENSMUST00000157913 138 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm22687-201ENSMUST00000158301 105 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm18358-201ENSMUST00000173179 1277 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm27218-201ENSMUST00000183745 392 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm20819-201ENSMUST00000191091 925 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm36638-201ENSMUST00000193295 400 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm7542-201ENSMUST00000201140 777 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm44282-201ENSMUST00000203199 190 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm45446-201ENSMUST00000209348 216 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.53□□□□□ -1.04
Rfx1P48377 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC8.53□□□□□ -1.04
Rfx1P48377 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 AC164116.2-201ENSMUST00000225398 1038 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 CT571256.1-201ENSMUST00000226045 585 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
Rfx1P48377 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
Rfx1P48377 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Rfx1P48377 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm16391-201ENSMUST00000086601 447 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Rfx1P48377 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Rfx1P48377 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rfx1P48377 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rfx1P48377 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.53□□□□□ -1.04
Rfx1P48377 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.04
Rfx1P48377 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rfx1P48377 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Rfx1P48377 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm15125-201ENSMUST00000116185 800 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm12090-201ENSMUST00000118692 758 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm13545-201ENSMUST00000119044 482 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm2709-201ENSMUST00000142979 350 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm24576-201ENSMUST00000175508 248 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm20689-201ENSMUST00000176033 279 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Mir6974-201ENSMUST00000184381 83 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm27595-201ENSMUST00000184579 112 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm28413-201ENSMUST00000189369 291 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm42977-201ENSMUST00000197497 144 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm8209-201ENSMUST00000206386 553 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 Gm16475-202ENSMUST00000209033 528 ntBASIC8.52□□□□□ -1.05
Rfx1P48377 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rfx1P48377 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.52□□□□□ -1.05
Rfx1P48377 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms