Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Gm23071-201ENSMUST00000158242 115 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm25603-201ENSMUST00000158361 105 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.78□□□□□ -1
Col18a1P39061 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC8.78□□□□□ -1
Col18a1P39061 Gm37631-201ENSMUST00000192275 364 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm44038-201ENSMUST00000203952 889 ntBASIC8.78□□□□□ -1
Col18a1P39061 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Gm45259-201ENSMUST00000209217 1006 ntBASIC8.78□□□□□ -1
Col18a1P39061 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col18a1P39061 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.78□□□□□ -1
Col18a1P39061 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col18a1P39061 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.78□□□□□ -1
Col18a1P39061 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Col18a1P39061 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.78□□□□□ -1
Col18a1P39061 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.78□□□□□ -1
Col18a1P39061 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Gm16205-201ENSMUST00000117720 1027 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm14220-201ENSMUST00000118114 449 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm11804-201ENSMUST00000121663 468 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.78□□□□□ -1
Col18a1P39061 Mir1970-201ENSMUST00000157839 104 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm22312-201ENSMUST00000158005 130 ntBASIC8.78□□□□□ -1
Col18a1P39061 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC8.78□□□□□ -1
Col18a1P39061 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC8.78□□□□□ -1
Col18a1P39061 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Gm27972-201ENSMUST00000184720 137 ntBASIC8.78□□□□□ -1
Col18a1P39061 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Col18a1P39061 Gm18850-201ENSMUST00000211578 388 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm45701-201ENSMUST00000212049 235 ntBASIC8.78□□□□□ -1
Col18a1P39061 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 AC166358.3-201ENSMUST00000221456 181 ntBASIC8.78□□□□□ -1
Col18a1P39061 Gm9202-201ENSMUST00000223036 437 ntBASIC8.78□□□□□ -1
Col18a1P39061 AC125543.4-201ENSMUST00000223385 117 ntBASIC8.78□□□□□ -1
Col18a1P39061 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Gm5830-201ENSMUST00000049117 443 ntBASIC8.78□□□□□ -1
Col18a1P39061 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col18a1P39061 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col18a1P39061 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.78□□□□□ -1
Col18a1P39061 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Col18a1P39061 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col18a1P39061 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.77□□□□□ -1
Col18a1P39061 Gm37142-201ENSMUST00000193718 3110 ntBASIC8.77□□□□□ -1
Col18a1P39061 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Col18a1P39061 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Col18a1P39061 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Gm23250-201ENSMUST00000157444 267 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Mir5125-201ENSMUST00000175240 79 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col18a1P39061 Gm26738-201ENSMUST00000181312 601 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC8.77□□□□□ -1.01
Col18a1P39061 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC8.77□□□□□ -1.01
Col18a1P39061 Gm18117-201ENSMUST00000187720 742 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Gm29011-201ENSMUST00000191059 712 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col18a1P39061 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC8.77□□□□□ -1.01
Col18a1P39061 AC153357.1-201ENSMUST00000219190 482 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 AC134254.2-201ENSMUST00000221262 170 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col18a1P39061 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC8.77□□□□□ -1.01
Col18a1P39061 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.77□□□□□ -1.01
Col18a1P39061 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col18a1P39061 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Col18a1P39061 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col18a1P39061 Gm24230-201ENSMUST00000104313 129 ntBASIC8.76□□□□□ -1.01
Col18a1P39061 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms