Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm43387-201ENSMUST00000196896 1066 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm8182-201ENSMUST00000197863 769 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.48□□□□□ -1.53
Cdx1P18111 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm44931-201ENSMUST00000206056 545 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm2089-201ENSMUST00000218294 479 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm2398-201ENSMUST00000218347 883 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC5.48□□□□□ -1.53
Cdx1P18111 AL837512.1-201ENSMUST00000223914 1073 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 AC122309.1-201ENSMUST00000226945 421 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 AC125087.1-201ENSMUST00000227552 514 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm5250-201ENSMUST00000059065 321 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdx1P18111 Olfr192-201ENSMUST00000080251 925 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Gm6887-201ENSMUST00000080945 482 ntBASIC5.48□□□□□ -1.53
Cdx1P18111 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdx1P18111 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdx1P18111 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdx1P18111 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx1P18111 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx1P18111 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Cdx1P18111 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdx1P18111 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm13311-201ENSMUST00000117863 379 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm13744-201ENSMUST00000118953 850 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm12710-201ENSMUST00000119011 216 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm15971-201ENSMUST00000119372 211 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm12477-201ENSMUST00000121221 571 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm25164-201ENSMUST00000158908 116 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm21839-201ENSMUST00000179536 378 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm5445-201ENSMUST00000180224 480 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm44044-201ENSMUST00000205178 1089 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm45506-201ENSMUST00000211620 280 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdx1P18111 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 AC151904.2-201ENSMUST00000218683 1177 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm19238-201ENSMUST00000221936 1260 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm33312-201ENSMUST00000222443 332 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm26130-201ENSMUST00000083171 138 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Gm25189-201ENSMUST00000083911 164 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Cdx1P18111 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
Cdx1P18111 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.47□□□□□ -1.53
Cdx1P18111 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Cdx1P18111 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx1P18111 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdx1P18111 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Cdx1P18111 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx1P18111 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx1P18111 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx1P18111 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx1P18111 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC5.46□□□□□ -1.53
Cdx1P18111 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC5.46□□□□□ -1.53
Cdx1P18111 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.46□□□□□ -1.54
Cdx1P18111 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx1P18111 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.46□□□□□ -1.54
Cdx1P18111 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx1P18111 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx1P18111 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Cdx1P18111 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms