Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm38237-201ENSMUST00000193366 376 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxa9P09631 Gm43576-201ENSMUST00000197937 871 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxa9P09631 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxa9P09631 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxa9P09631 Gm22053-201ENSMUST00000083394 200 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxa9P09631 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Hoxa9P09631 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxa9P09631 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxa9P09631 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxa9P09631 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxa9P09631 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxa9P09631 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxa9P09631 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.81□□□□□ -1.32
Hoxa9P09631 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Hoxa9P09631 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm5456-201ENSMUST00000170706 844 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm25675-201ENSMUST00000174979 118 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm17045-201ENSMUST00000178600 844 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm26509-201ENSMUST00000180947 948 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm18849-201ENSMUST00000189861 560 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm6074-201ENSMUST00000193340 451 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm43762-201ENSMUST00000201521 295 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm18586-201ENSMUST00000217265 518 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm5080-201ENSMUST00000220341 743 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.8□□□□□ -1.32
Hoxa9P09631 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxa9P09631 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Hoxa9P09631 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm23485-201ENSMUST00000104181 155 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm11462-201ENSMUST00000117749 562 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm23674-201ENSMUST00000157473 131 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm25717-201ENSMUST00000158631 353 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm20615-201ENSMUST00000177503 705 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm25244-201ENSMUST00000178089 132 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm5260-201ENSMUST00000186157 949 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm37177-201ENSMUST00000193768 417 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms