Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm7931-201ENSMUST00000121537 271 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm22342-201ENSMUST00000122647 298 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm23071-201ENSMUST00000158242 115 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm16112-201ENSMUST00000159075 382 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm16269-201ENSMUST00000160532 409 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm2225-201ENSMUST00000209570 377 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Grik1-209ENSMUST00000227986 2942 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col4a6B1AVK5 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm13333-201ENSMUST00000119424 781 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm14237-201ENSMUST00000122080 430 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm6061-201ENSMUST00000175860 492 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm29813-201ENSMUST00000195856 447 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm45473-201ENSMUST00000211452 616 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm17997-201ENSMUST00000211801 840 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col4a6B1AVK5 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm22714-201ENSMUST00000116894 78 ntBASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm13428-201ENSMUST00000117540 365 ntBASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.77□□□□□ -1.32
Col4a6B1AVK5 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm21241-201ENSMUST00000179551 934 ntBASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Mir6903-201ENSMUST00000183597 88 ntBASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col4a6B1AVK5 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms