Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm26419-201ENSMUST00000104272 133 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm17184-201ENSMUST00000111864 462 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm649-201ENSMUST00000117284 1054 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm3760-201ENSMUST00000167475 804 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm24756-201ENSMUST00000177002 96 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm9167-201ENSMUST00000182469 962 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Mir6241-201ENSMUST00000184225 103 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm28580-201ENSMUST00000186767 88 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm28114-201ENSMUST00000187232 379 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm4290-201ENSMUST00000206897 814 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 AC158388.1-201ENSMUST00000225441 256 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 AC154730.1-201ENSMUST00000227874 816 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm22005-201ENSMUST00000082795 141 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Khdc3Q9CWU5 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.52□□□□□ -1.36
Khdc3Q9CWU5 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Gm11903-201ENSMUST00000118958 727 ntBASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Gm15096-201ENSMUST00000121918 878 ntBASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Gm14212-201ENSMUST00000122023 826 ntBASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Gm11581-201ENSMUST00000122024 763 ntBASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Khdc3Q9CWU5 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms