Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Mir7058-201ENSMUST00000184637 75 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm37620-201ENSMUST00000192910 501 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm43906-201ENSMUST00000203194 906 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rpa3Q9CQ71 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm11987-201ENSMUST00000118524 381 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm5601-201ENSMUST00000118909 972 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm14353-201ENSMUST00000122200 869 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm23888-201ENSMUST00000122690 253 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm11962-201ENSMUST00000145746 255 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm4997-201ENSMUST00000154056 360 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm27299-201ENSMUST00000184593 103 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm21054-201ENSMUST00000203981 380 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.98□□□□□ -1.29
Rpa3Q9CQ71 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm25093-201ENSMUST00000103993 132 ntBASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm24888-201ENSMUST00000104387 130 ntBASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm12573-201ENSMUST00000118158 286 ntBASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
Rpa3Q9CQ71 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms