Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 AC124715.1-201ENSMUST00000228480 754 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm7493-201ENSMUST00000085919 626 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm44014-201ENSMUST00000205150 1509 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.27□□□□□ -1.08
Trim11Q99PQ2 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm12598-201ENSMUST00000117333 830 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm14016-201ENSMUST00000119095 486 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm11404-201ENSMUST00000120872 494 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm12754-201ENSMUST00000121908 454 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm25178-201ENSMUST00000122633 325 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Mir1898-201ENSMUST00000122643 83 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm24139-201ENSMUST00000122780 288 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm29474-201ENSMUST00000187688 379 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm28952-201ENSMUST00000189285 681 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm28145-201ENSMUST00000189742 380 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm28396-201ENSMUST00000190309 379 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm28341-201ENSMUST00000190883 472 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm37491-201ENSMUST00000192552 1111 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Trbv28-201ENSMUST00000192804 264 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm37404-201ENSMUST00000195726 359 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm43238-201ENSMUST00000196463 359 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm44946-201ENSMUST00000208425 572 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm45478-201ENSMUST00000209472 211 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 AC125190.2-201ENSMUST00000221160 497 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 AC112972.1-201ENSMUST00000227329 365 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.27□□□□□ -1.09
Trim11Q99PQ2 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim11Q99PQ2 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm6545-201ENSMUST00000217186 1786 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm24373-201ENSMUST00000104393 132 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms