Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm11343-201ENSMUST00000120579 599 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm15750-201ENSMUST00000120970 616 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm43089-201ENSMUST00000199162 275 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm45734-201ENSMUST00000211916 411 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm4556-201ENSMUST00000217808 355 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Scrt1Q99M85 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Scrt1Q99M85 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.94□□□□□ -1.46
Scrt1Q99M85 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Mir674-201ENSMUST00000102421 100 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm8812-201ENSMUST00000118496 412 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm15616-201ENSMUST00000118662 375 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm12740-201ENSMUST00000118794 308 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm11198-201ENSMUST00000119771 974 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm23896-201ENSMUST00000158109 130 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm25433-201ENSMUST00000158283 286 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm22262-201ENSMUST00000158713 86 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm18006-201ENSMUST00000177411 662 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm4373-201ENSMUST00000178571 556 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm27348-201ENSMUST00000184511 170 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm38097-201ENSMUST00000192936 439 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm38840-201ENSMUST00000204716 843 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm33178-201ENSMUST00000212090 257 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Olfr519-201ENSMUST00000084752 960 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Scrt1Q99M85 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.93□□□□□ -1.46
Scrt1Q99M85 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Scrt1Q99M85 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Scrt1Q99M85 AC121286.2-201ENSMUST00000218069 2470 ntBASIC5.92□□□□□ -1.46
Scrt1Q99M85 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Scrt1Q99M85 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Scrt1Q99M85 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.92□□□□□ -1.46
Scrt1Q99M85 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Scrt1Q99M85 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Scrt1Q99M85 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Scrt1Q99M85 Gm37373-201ENSMUST00000194005 2812 ntBASIC5.92□□□□□ -1.46
Scrt1Q99M85 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Scrt1Q99M85 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.92□□□□□ -1.46
Scrt1Q99M85 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms