Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm44896-201ENSMUST00000206190 772 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm17849-201ENSMUST00000219788 853 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.04□□□□□ -1.12
Brf1Q8CFK2 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm12573-201ENSMUST00000118158 286 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm6987-201ENSMUST00000119319 428 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm15149-201ENSMUST00000119370 360 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm12229-201ENSMUST00000120487 468 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm14587-201ENSMUST00000121714 658 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm23762-201ENSMUST00000158348 106 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm3585-201ENSMUST00000173438 875 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm10136-201ENSMUST00000183196 435 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm6575-201ENSMUST00000222946 697 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm24919-201ENSMUST00000083020 106 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Mir425-201ENSMUST00000083645 85 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC8.03□□□□□ -1.12
Brf1Q8CFK2 Gm10555-201ENSMUST00000193178 1791 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm12931-201ENSMUST00000117046 324 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm11962-201ENSMUST00000145746 255 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm26381-201ENSMUST00000174895 92 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Mir7058-201ENSMUST00000184637 75 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm17895-201ENSMUST00000194028 874 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm44694-201ENSMUST00000205317 1298 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm5418-201ENSMUST00000206932 528 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 n-R5s56-201ENSMUST00000082521 105 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm24036-201ENSMUST00000082868 156 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms