Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28bQ8CEG5 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm24473-201ENSMUST00000104483 131 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm26736-201ENSMUST00000180425 1236 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm8502-201ENSMUST00000185708 901 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm21147-201ENSMUST00000186046 913 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm30517-201ENSMUST00000197350 772 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm18628-201ENSMUST00000220584 475 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28bQ8CEG5 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.52□□□□□ -1.36
Ccdc28bQ8CEG5 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Rnu11-201ENSMUST00000104135 134 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14869-201ENSMUST00000119007 884 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13163-201ENSMUST00000119875 336 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13237-201ENSMUST00000122151 635 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm7420-201ENSMUST00000162836 842 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm17212-201ENSMUST00000166666 259 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm38305-201ENSMUST00000194825 223 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm19185-201ENSMUST00000196365 643 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm44258-201ENSMUST00000204925 301 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm17918-201ENSMUST00000205315 574 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm45628-201ENSMUST00000210849 274 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm46424-201ENSMUST00000221567 168 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Ccdc28bQ8CEG5 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms