Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm37355-201ENSMUST00000193345 606 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 CT025525.1-201ENSMUST00000226325 1054 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Gm5341-201ENSMUST00000058881 489 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Mir106b-201ENSMUST00000083580 82 ntBASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim9Q8C7M3 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trim9Q8C7M3 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.34□□□□□ -1.24
Trim9Q8C7M3 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.34□□□□□ -1.24
Trim9Q8C7M3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.34□□□□□ -1.24
Trim9Q8C7M3 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Trim9Q8C7M3 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm14938-201ENSMUST00000119482 943 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm6027-201ENSMUST00000121467 756 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm22820-201ENSMUST00000157205 329 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm8715-201ENSMUST00000162728 531 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm9064-201ENSMUST00000163579 566 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm28620-201ENSMUST00000190463 439 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm18012-201ENSMUST00000204558 773 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm44147-201ENSMUST00000204658 94 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm18838-201ENSMUST00000204855 886 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC159886.1-201ENSMUST00000217099 1091 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC151904.5-201ENSMUST00000218975 549 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm45177-201ENSMUST00000209104 2307 ntBASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim9Q8C7M3 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Mir678-201ENSMUST00000102114 84 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm24869-201ENSMUST00000104072 128 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Gm15007-201ENSMUST00000119982 710 ntBASIC7.32□□□□□ -1.24
Trim9Q8C7M3 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms